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Intron Name: Anas_platyrhynchos_platyrhynchos_4_40048116_40049759_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

40048116 - 40049759

Intron Length:

1644

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTAGGTTTT

5'SS Class:

strong_major

3'SS Sequence:

TTTCTTGTTACAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTCAT

U12 Branch Point Sequence:

TCTACTTCAATT

Flanking Amino Acid:

FSDITPTPFVPYTVTHLKLC

Intron Amino Acid Position:

140

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.4

0.74

80.5

34.9

Major BPS

100

1.24

0.5

100

Major PPT

88.4

0.86

0.8

83.5

31.6

Minor 5ss

44.9

-0.5

3.2

63.2

43.8

Minor BPS

62.2

0.46

1.6

76.62

40.5

Associated Gene:

Gene:

PGM2

Ensembl Gene ID:

ENSAPLG00000008271

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008666

40041691 - 40059771

18081