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Intron Name: Anas_platyrhynchos_platyrhynchos_4_40123275_40126708_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

40123275 - 40126708

Intron Length:

3434

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACG|GTAAAGCAA

5'SS Class:

major

3'SS Sequence:

CTGCTTTTTTTAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTGTTAT

U12 Branch Point Sequence:

TACTTGTTATCT

Flanking Amino Acid:

IAENRTMLFTIGQSEVYLIS

Intron Amino Acid Position:

318

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.1

0.48

1.1

59.5

Major BPS

81.3

0.78

1.1

71.7

44.6

Major PPT

81.5

0.71

0.8

80.5

31.5

Minor 5ss

29.9

-2.3

3.4

38.6

46.6

Minor BPS

49.4

0.04

2.3

72.18

44.9

Associated Gene:

Gene:

TBC1D1

Ensembl Gene ID:

ENSAPLG00000007546

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044662

40075275 - 40184411

109137

ENSAPLT00000007878

40075275 - 40182569

107295