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Intron Name: Anas_platyrhynchos_platyrhynchos_4_40129997_40130430_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

40129997 - 40130430

Intron Length:

434

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTAAGTAAA

5'SS Class:

strong_major

3'SS Sequence:

CTGTTCTTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCTTTAG

U12 Branch Point Sequence:

TGTTCTTTAGCA

Flanking Amino Acid:

YVFQCTDEALVDEIMMTLKQ

Intron Amino Acid Position:

383

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.94

0.8

26.1

Major BPS

59.9

0.25

1.6

59.6

46.8

Major PPT

86.5

0.82

0.8

84.4

30.5

Minor 5ss

35.2

-1.7

2.7

39.2

40.5

Minor BPS

72.2

0.69

1.5

80.17

35.7

Associated Gene:

Gene:

TBC1D1

Ensembl Gene ID:

ENSAPLG00000007546

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007878

40075275 - 40182569

107295

ENSAPLT00000044662

40075275 - 40184411

109137