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Intron Name: Anas_platyrhynchos_platyrhynchos_4_40130564_40131973_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

40130564 - 40131973

Intron Length:

1410

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGGTTC

5'SS Class:

strong_major

3'SS Sequence:

TCCTTCATGTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTTGAC

U12 Branch Point Sequence:

TTGTCCTTCATG

Flanking Amino Acid:

SLHKLCEKIEGLPPFKTKLE

Intron Amino Acid Position:

427

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.1

0.88

0.8

79.1

30.7

Major BPS

77.7

0.69

0.9

69.1

37.9

Major PPT

69.6

0.44

0.9

70.1

35.1

Minor 5ss

35.8

-1.6

3.4

49.2

47.3

Minor BPS

65.7

0.35

1.8

70.86

42.9

Associated Gene:

Gene:

TBC1D1

Ensembl Gene ID:

ENSAPLG00000007546

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044662

40075275 - 40184411

109137

ENSAPLT00000007878

40075275 - 40182569

107295