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Intron Name: Anas_platyrhynchos_platyrhynchos_4_40132066_40133697_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

40132066 - 40133697

Intron Length:

1632

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGCTCT

5'SS Class:

strong_major

3'SS Sequence:

TTTTTAATTAAAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

GTGTTTTTAATT

Flanking Amino Acid:

EQASVFEEVKKLRPRNDQKE

Intron Amino Acid Position:

458

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.5

0.95

0.8

81.4

33.4

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

0.59

1.1

76.5

35.6

Minor 5ss

46.5

-0.4

2.8

65.7

45.4

Minor BPS

72.2

0.78

1.1

79.65

37.1

Associated Gene:

Gene:

TBC1D1

Ensembl Gene ID:

ENSAPLG00000007546

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044662

40075275 - 40184411

109137

ENSAPLT00000007878

40075275 - 40182569

107295