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Intron Name: Anas_platyrhynchos_platyrhynchos_4_4013359_4014604_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4013359 - 4014604

Intron Length:

1246

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTTGGTTTT

5'SS Class:

major

3'SS Sequence:

GTTCTTTTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTGAG

U12 Branch Point Sequence:

TTTTCCAAACCT

Flanking Amino Acid:

PIDVCEIGSKVRSSGEIVKV

Intron Amino Acid Position:

303

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.9

0.64

1.2

79.9

Major BPS

72.4

0.56

1.5

71.4

45.1

Major PPT

0.88

0.7

84.2

30.7

Minor 5ss

41.1

-1

3.1

58.6

Minor BPS

55.1

0.24

2.2

84.77

41.8

Associated Gene:

Gene:

PPA2

Ensembl Gene ID:

ENSAPLG00000010174

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010617

3996143 - 4031941

35799