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Intron Name: Anas_platyrhynchos_platyrhynchos_4_40133809_40136206_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

40133809 - 40136206

Intron Length:

2398

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGTAAC

5'SS Class:

strong_major

3'SS Sequence:

TAAACACTTACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAA

U12 Branch Point Sequence:

CCTTTTTAAACA

Flanking Amino Acid:

EHVHVWEAKQTSQSPAENAA

Intron Amino Acid Position:

495

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

97.4

1.12

0.6

90.5

20.4

Major BPS

90.4

0.7

90.2

19.3

Major PPT

67.7

0.4

58.8

41.5

Minor 5ss

-1.6

2.7

44.9

43.2

Minor BPS

57.8

0.24

1.7

65.59

41.9

Associated Gene:

Gene:

TBC1D1

Ensembl Gene ID:

ENSAPLG00000007546

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044662

40075275 - 40184411

109137

ENSAPLT00000007878

40075275 - 40182569

107295