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Intron Name: Anas_platyrhynchos_platyrhynchos_4_40145378_40146578_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

40145378 - 40146578

Intron Length:

1201

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGGGTTC

5'SS Class:

strong_major

3'SS Sequence:

TCTGCGATTTTAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCCTCAC

U12 Branch Point Sequence:

TGTTCTGCGATT

Flanking Amino Acid:

NNTSDFRSATSDYESQRSQQ

Intron Amino Acid Position:

746

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.5

0.74

73.9

Major BPS

72.4

0.56

73.5

32.5

Major PPT

70.2

0.45

0.9

66.5

39.4

Minor 5ss

39.9

-1.1

3.6

57.8

47.2

Minor BPS

47.3

-0.1

2.2

71.52

40.1

Associated Gene:

Gene:

TBC1D1

Ensembl Gene ID:

ENSAPLG00000007546

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044662

40075275 - 40184411

109137