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Intron Name: Anas_platyrhynchos_platyrhynchos_4_40146719_40158629_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

40146719 - 40158629

Intron Length:

11911

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGTCTT

5'SS Class:

strong_major

3'SS Sequence:

CTCTCTTTCAAAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCACAA

U12 Branch Point Sequence:

TAGTTCACAACA

Flanking Amino Acid:

KACDSPSRYDDYSELGELPP

Intron Amino Acid Position:

710

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.4

0.93

0.8

83.5

Major BPS

68.5

0.46

75.3

29.8

Major PPT

71.9

0.49

73.3

29.1

Minor 5ss

40.3

-1.1

3.1

56.2

42.2

Minor BPS

51.5

0.04

1.8

65.68

40.4

Associated Gene:

Gene:

TBC1D1

Ensembl Gene ID:

ENSAPLG00000007546

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044662

40075275 - 40184411

109137

ENSAPLT00000007878

40075275 - 40182569

107295