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Intron Name: Anas_platyrhynchos_platyrhynchos_4_40162977_40165537_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

40162977 - 40165537

Intron Length:

2561

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGCACT

5'SS Class:

strong_major

3'SS Sequence:

CTTCTTCTCTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TATTAAT

U12 Branch Point Sequence:

TATTAATGACCT

Flanking Amino Acid:

VEKIHSAVGQGVPRHHRGEI

Intron Amino Acid Position:

826

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.3

0.97

0.8

84.4

33.5

Major BPS

91.8

1.04

0.7

90.2

19.3

Major PPT

85.6

0.8

0.7

84.2

23.8

Minor 5ss

-0.9

2.9

58.6

45.7

Minor BPS

47.2

-0.1

2.1

72.87

Associated Gene:

Gene:

TBC1D1

Ensembl Gene ID:

ENSAPLG00000007546

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044662

40075275 - 40184411

109137

ENSAPLT00000007878

40075275 - 40182569

107295