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Intron Name: Anas_platyrhynchos_platyrhynchos_4_40165697_40172289_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

40165697 - 40172289

Intron Length:

6593

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTAAGTACA

5'SS Class:

strong_major

3'SS Sequence:

GCTATTTTCACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGTAAAT

U12 Branch Point Sequence:

AAATCACTAACC

Flanking Amino Acid:

SQQHAILIDLGRTFPTHPYF

Intron Amino Acid Position:

879

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

97.1

1.11

0.7

89.8

22.5

Major BPS

67.2

0.43

1.2

73.3

39.1

Major PPT

77.6

0.62

0.9

71.6

38.2

Minor 5ss

-1.6

2.6

43.5

43.6

Minor BPS

52.5

0.06

1.9

65.75

38.6

Associated Gene:

Gene:

TBC1D1

Ensembl Gene ID:

ENSAPLG00000007546

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044662

40075275 - 40184411

109137

ENSAPLT00000007878

40075275 - 40182569

107295