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Intron Name: Anas_platyrhynchos_platyrhynchos_4_40172535_40173001_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

40172535 - 40173001

Intron Length:

467

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATGATTT

5'SS Class:

strong_major

3'SS Sequence:

TTTATCCATGTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TTTTTTTTAATC

Flanking Amino Acid:

QYRPDMTILQIQMYQLSRLL

Intron Amino Acid Position:

961

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.1

0.85

0.9

83.3

29.2

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

75.8

0.58

0.9

71.2

34.7

Minor 5ss

2.8

73.4

43.4

Minor BPS

81.7

0.97

0.9

85.33

Associated Gene:

Gene:

TBC1D1

Ensembl Gene ID:

ENSAPLG00000007546

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007878

40075275 - 40182569

107295

ENSAPLT00000044662

40075275 - 40184411

109137