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Intron Name: Anas_platyrhynchos_platyrhynchos_4_40173162_40177637_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

40173162 - 40177637

Intron Length:

4476

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTAATTCTT

5'SS Class:

major

3'SS Sequence:

TTTGTTTTCACAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GCTTGAT

U12 Branch Point Sequence:

TTTGTTTTCACA

Flanking Amino Acid:

FPLGFVARVFDMLFLQGSEA

Intron Amino Acid Position:

1014

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.1

0.69

76.4

38.8

Major BPS

66.1

0.4

1.3

59.3

47.1

Major PPT

87.8

0.85

0.7

83.5

31.6

Minor 5ss

40.4

-1.1

3.1

56.3

42.2

Minor BPS

58.6

0.26

1.8

73.92

38.7

Associated Gene:

Gene:

TBC1D1

Ensembl Gene ID:

ENSAPLG00000007546

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007878

40075275 - 40182569

107295

ENSAPLT00000044662

40075275 - 40184411

109137