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Intron Name: Anas_platyrhynchos_platyrhynchos_4_40180259_40182368_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

40180259 - 40182368

Intron Length:

2110

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACGATTT

5'SS Class:

strong_major

3'SS Sequence:

CCCTCTTTGAAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTCCT

U12 Branch Point Sequence:

CCCTCTTTGAAA

Flanking Amino Acid:

QNFDLLEELQVANGKIQNLE

Intron Amino Acid Position:

1128

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.5

0.81

0.9

81.8

32.8

Major BPS

39.5

-0.6

4.3

85.7

34.9

Major PPT

62.7

0.29

1.1

65.4

Minor 5ss

42.8

-0.8

3.4

64.9

46.4

Minor BPS

55.3

0.16

1.5

58.45

41.8

Associated Gene:

Gene:

TBC1D1

Ensembl Gene ID:

ENSAPLG00000007546

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044662

40075275 - 40184411

109137

ENSAPLT00000007878

40075275 - 40182569

107295