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Intron Name: Anas_platyrhynchos_platyrhynchos_4_403069_403820_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

403069 - 403820

Intron Length:

752

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGCAGT

5'SS Class:

strong_major

3'SS Sequence:

TGTTTATATACAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTATAT

U12 Branch Point Sequence:

CTTTTGTTAACC

Flanking Amino Acid:

KAVDMKLQSELALQEEKLRI

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.5

0.95

0.9

81.8

38.5

Major BPS

79.2

0.73

75.3

39.4

Major PPT

79.4

0.66

73.8

Minor 5ss

41.1

-1

2.9

57.9

46.4

Minor BPS

64.9

0.45

2.1

77.35

39.1

Associated Gene:

Gene:

AP1AR

Ensembl Gene ID:

ENSAPLG00000013936

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014532

395267 - 410869

15603