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Intron Name: Anas_platyrhynchos_platyrhynchos_4_40352677_40353155_F


Intron Information:

Intron Rank:
3

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
40352677 - 40353155

Intron Length:
479

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CAG|GTTCGTGTG

5'SS Class:
major

3'SS Sequence:
CTTCCCCATACAG|T

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TTTTGAC

U12 Branch Point Sequence:
CTCCTCTGACCC

Flanking Amino Acid:
DEMESPSSMPVPVIESFEKP

Intron Amino Acid Position:
185

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
73.9
0.56
1.2
68.4
42.6

Major BPS
86.5
0.91
0.8
77.4
37.4

Major PPT
75.8
0.58
0.8
69.3
30.3

Minor 5ss
31.6
-2.1
3.3
41
45.4

Minor BPS
47.1
-0.2
1.8
55.77
42.7

Associated Gene:

Gene:
KLF3

Ensembl Gene ID:

Chromosome:
4

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

40338966 - 40359340
20375