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Intron Name: Anas_platyrhynchos_platyrhynchos_4_403920_407074_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

403920 - 407074

Intron Length:

3155

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGGGGA

5'SS Class:

strong_major

3'SS Sequence:

CTTTTTTCAATAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTCAA

U12 Branch Point Sequence:

TTTTCAACAATT

Flanking Amino Acid:

RAAKQKKLLEQRRQQRITQR

Intron Amino Acid Position:

126

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.2

0.81

0.9

69.2

37.4

Major BPS

90.8

1.01

0.7

91.9

19.6

Major PPT

79.9

0.67

0.8

77.7

29.6

Minor 5ss

23.1

-3.1

3.2

43.5

Minor BPS

54.4

0.22

2.1

82.92

37.9

Associated Gene:

Gene:

AP1AR

Ensembl Gene ID:

ENSAPLG00000013936

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014532

395267 - 410869

15603