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Intron Name: Anas_platyrhynchos_platyrhynchos_4_40401471_40401597_R

Intron Information:

Intron Rank:

136284

Intron Class:

major

Intron Phase:

Intron Coordinates:

40401471 - 40401597

Intron Length:

127

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCA|GTAAGTGCC

5'SS Class:

major

3'SS Sequence:

GCTTCGTTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CCCTCAC

U12 Branch Point Sequence:

TGTTCCTCTTTT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.6

0.6

68.5

38.3

Major BPS

60.1

0.25

1.1

62.9

34.3

Major PPT

80.1

0.68

0.9

76.4

37.6

Minor 5ss

36.1

-1.6

3.2

50.7

39.7

Minor BPS

40.5

-0.6

3.6

73.05

43.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000020738

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000032758

40400662 - 40402411

1750