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Intron Name: Anas_platyrhynchos_platyrhynchos_4_40404711_40406238_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

40404711 - 40406238

Intron Length:

1528

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCA|GTGAGTAAT

5'SS Class:

major

3'SS Sequence:

TTTGTTCTTGTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AAGTAAT

U12 Branch Point Sequence:

GACTTTTAGACA

Flanking Amino Acid:

EETPPEQSSPATDSSSKASR

Intron Amino Acid Position:

132

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.59

77.2

32.9

Major BPS

67.8

0.44

1.1

67.7

36.5

Major PPT

85.6

0.8

0.7

81.6

30.5

Minor 5ss

34.1

-1.8

2.9

47.9

41.8

Minor BPS

48.1

-0.1

1.6

54.59

38.5

Associated Gene:

Gene:

FAM114A1

Ensembl Gene ID:

ENSAPLG00000007063

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007355

40404318 - 40435674

31357