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Intron Name: Anas_platyrhynchos_platyrhynchos_4_40406327_40416146_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

40406327 - 40416146

Intron Length:

9820

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTAAGTGCT

5'SS Class:

strong_major

3'SS Sequence:

GTTCTTGCTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTCAA

U12 Branch Point Sequence:

GTTTTCAAATCA

Flanking Amino Acid:

SLLSSASATVGHGITAVKEK

Intron Amino Acid Position:

161

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.9

0.87

0.9

78.8

35.5

Major BPS

90.8

1.01

0.7

91.9

19.6

Major PPT

79.1

0.66

0.9

73.2

37.2

Minor 5ss

34.9

-1.7

3.2

42.4

44.3

Minor BPS

46.4

-0.2

2.1

64.52

41.8

Associated Gene:

Gene:

FAM114A1

Ensembl Gene ID:

ENSAPLG00000007063

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007355

40404318 - 40435674

31357