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Intron Name: Anas_platyrhynchos_platyrhynchos_4_40428445_40429715_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

40428445 - 40429715

Intron Length:

1271

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAAATAC

5'SS Class:

strong_major

3'SS Sequence:

AATTTAATTTAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTTAAT

U12 Branch Point Sequence:

ATTAATTTAATT

Flanking Amino Acid:

TEVHKNKTVEEIYMLSIESL

Intron Amino Acid Position:

458

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.2

0.76

0.9

74.5

29.8

Major BPS

90.7

1.01

0.7

19.9

Major PPT

64.7

0.33

1.2

66.7

42.5

Minor 5ss

37.6

-1.4

3.2

49.9

46.6

Minor BPS

65.5

0.57

1.5

80.14

35.6

Associated Gene:

Gene:

FAM114A1

Ensembl Gene ID:

ENSAPLG00000007063

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007355

40404318 - 40435674

31357