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Intron Name: Anas_platyrhynchos_platyrhynchos_4_40462042_40463571_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

40462042 - 40463571

Intron Length:

1530

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTAAGTAGG

5'SS Class:

strong_major

3'SS Sequence:

TTTTAATTTGTAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TTTGTTTTAATT

Flanking Amino Acid:

HQGSGVITKKIPKEKGSLEE

Intron Amino Acid Position:

164

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.6

0.82

0.9

75.5

40.6

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

83.1

0.74

0.8

78.3

34.8

Minor 5ss

36.8

-1.5

2.7

42.8

38.2

Minor BPS

74.3

0.84

1.2

86.64

33.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000007444

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007720

40445144 - 40468415

23272