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Intron Name: Anas_platyrhynchos_platyrhynchos_4_40463854_40468207_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

40463854 - 40468207

Intron Length:

4354

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGTGAT

5'SS Class:

strong_major

3'SS Sequence:

CTTTGTTTTTCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATATGAT

U12 Branch Point Sequence:

TTTTGCTGATAT

Flanking Amino Acid:

CLPEFFKIHEANTIIVSCMD

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

1.01

0.7

86.6

22.3

Major BPS

75.8

0.64

65.8

Major PPT

89.9

0.9

0.7

29.4

Minor 5ss

28.9

-2.4

3.2

39.6

46.4

Minor BPS

49.4

0.03

2.2

78.31

43.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000007444

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007720

40445144 - 40468415

23272