Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_4_40516700_40517666_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

40516700 - 40517666

Intron Length:

967

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTCTTGGTT

5'SS Class:

weak_major

3'SS Sequence:

TGTTGTCATTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TTTTTTATAACT

Flanking Amino Acid:

FAVGGMDATKGATSIEKYEL

Intron Amino Acid Position:

432

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

58.8

0.21

1.3

62.3

42.1

Major BPS

96.5

1.15

0.6

34.2

Major PPT

0.52

0.9

70.9

40.1

Minor 5ss

36.7

-1.5

3.6

48.2

Minor BPS

74.1

0.84

1.5

92.32

29.7

Associated Gene:

Gene:

KLHL5

Ensembl Gene ID:

ENSAPLG00000007450

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039156

40472888 - 40525135

52248

ENSAPLT00000007758

40489075 - 40525135

36061