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Intron Name: Anas_platyrhynchos_platyrhynchos_4_4051915_4055694_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4051915 - 4055694

Intron Length:

3780

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCG|GTATGTTTA

5'SS Class:

strong_major

3'SS Sequence:

TTCTCTTTAACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTGACAC

U12 Branch Point Sequence:

TTCTCTTTAACA

Flanking Amino Acid:

TDVEPPMQVIGEVFLQIKGP

Intron Amino Acid Position:

273

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.9

0.73

77.1

34.1

Major BPS

57.7

0.19

1.2

66.7

Major PPT

83.5

0.75

0.8

80.5

30.1

Minor 5ss

51.3

0.05

2.4

44.2

Minor BPS

85.2

1.1

86.93

31.8

Associated Gene:

Gene:

ARHGEF38

Ensembl Gene ID:

ENSAPLG00000010561

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010994

4039884 - 4073668

33785