Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_4_40528123_40529743_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

40528123 - 40529743

Intron Length:

1621

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTAAGATTA

5'SS Class:

strong_major

3'SS Sequence:

TAATATTTTTTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGTTAAT

U12 Branch Point Sequence:

CATGTGTTAATA

Flanking Amino Acid:

KTLGNFLAVTGGDRTVSIFD

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.7

0.79

77.8

33.3

Major BPS

84.4

0.85

34.5

Major PPT

76.5

0.6

0.9

74.2

40.6

Minor 5ss

41.1

-1

3.1

48.1

47.5

Minor BPS

48.2

-0.1

2.1

59.13

41.6

Associated Gene:

Gene:

WDR19

Ensembl Gene ID:

ENSAPLG00000010193

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045365

40528001 - 40560708

32708

ENSAPLT00000010656

40528001 - 40560708

32708