Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_4_40542935_40543490_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

40542935 - 40543490

Intron Length:

556

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTACATCTG

5'SS Class:

major

3'SS Sequence:

TTGTTTTCTGAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAG

U12 Branch Point Sequence:

TTAGTTTTAAGT

Flanking Amino Acid:

EMLTQTLMLKRFSEAWEICR

Intron Amino Acid Position:

669

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.6

0.6

1.1

66.2

45.1

Major BPS

75.6

0.64

1.5

34.5

Major PPT

77.5

0.62

79.6

32.8

Minor 5ss

36.1

-1.6

3.3

49.6

46.6

Minor BPS

59.2

0.37

1.7

75.56

41.8

Associated Gene:

Gene:

WDR19

Ensembl Gene ID:

ENSAPLG00000010193

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045365

40528001 - 40560708

32708

ENSAPLT00000010656

40528001 - 40560708

32708