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Intron Name: Anas_platyrhynchos_platyrhynchos_4_40547014_40547120_F


Intron Information:

Intron Rank:
21

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
40547014 - 40547120

Intron Length:
107

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
AAG|GTATGCAGA

5'SS Class:
strong_major

3'SS Sequence:
TTCAATATTACAG|C

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TTATAAT

U12 Branch Point Sequence:
TGATTTTCAATA

Flanking Amino Acid:
DCGTILESMKQFSEAAQLYE

Intron Amino Acid Position:
865

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
81.4
0.74
1
70.6
41.3

Major BPS
87.8
0.94
0.9
86.6
28.1

Major PPT
76.5
0.6
0.9
69.3
40.2

Minor 5ss
44.8
-0.6
2.6
57.7
46.6

Minor BPS
57.1
0.22
1.5
64.66
35.8

Associated Gene:

Gene:
WDR19

Ensembl Gene ID:

Chromosome:
4

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

40528001 - 40560708
32708

40528001 - 40560708
32708