Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_4_40552275_40557085_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

40552275 - 40557085

Intron Length:

4811

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATTGGAT

5'SS Class:

major

3'SS Sequence:

TCGGTTACTTAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATTAAT

U12 Branch Point Sequence:

TCAGTATTAATT

Flanking Amino Acid:

LMGESDGMPKDAKYLFRLYM

Intron Amino Acid Position:

1098

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.6

0.53

1.1

67.6

37.3

Major BPS

91.8

1.04

0.7

90.2

19.3

Major PPT

62.4

0.28

1.1

65.1

40.3

Minor 5ss

-1.5

3.6

55.1

49.2

Minor BPS

54.2

0.21

1.7

69.07

42.3

Associated Gene:

Gene:

WDR19

Ensembl Gene ID:

ENSAPLG00000010193

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045365

40528001 - 40560708

32708

ENSAPLT00000010656

40528001 - 40560708

32708