Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_4_40559466_40559752_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

40559466 - 40559752

Intron Length:

287

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAC|GTAAGTACT

5'SS Class:

strong_major

3'SS Sequence:

CATTCTGTTGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTTCAT

U12 Branch Point Sequence:

TTGGCATTATTT

Flanking Amino Acid:

VANNISKFPSHIVPILTSTV

Intron Amino Acid Position:

1199

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.3

0.74

1.2

84.4

33.5

Major BPS

91.2

1.02

0.7

91.7

20.2

Major PPT

78.9

0.65

0.9

72.7

37.1

Minor 5ss

39.8

-1.1

2.8

52.2

37.4

Minor BPS

50.9

0.11

72.68

44.6

Associated Gene:

Gene:

WDR19

Ensembl Gene ID:

ENSAPLG00000010193

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045365

40528001 - 40560708

32708

ENSAPLT00000010656

40528001 - 40560708

32708