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Intron Name: Anas_platyrhynchos_platyrhynchos_4_40562829_40563359_F

Intron Information:

Intron Rank:

132386

Intron Class:

major

Intron Phase:

Intron Coordinates:

40562829 - 40563359

Intron Length:

531

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAA|GTAAGTTGG

5'SS Class:

strong_major

3'SS Sequence:

TCTTTTAAAACAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAA

U12 Branch Point Sequence:

CTTCTTTTAAAA

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.8

0.8

0.9

72.5

39.9

Major BPS

90.4

0.7

90.2

19.3

Major PPT

0.54

70.9

37.6

Minor 5ss

41.3

-1

2.8

49.6

Minor BPS

62.4

0.39

1.4

69.31

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000021131

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038368

40562771 - 40564554

1784