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Intron Name: Anas_platyrhynchos_platyrhynchos_4_40565830_40566436_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

40565830 - 40566436

Intron Length:

607

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAAAATT

5'SS Class:

strong_major

3'SS Sequence:

CCACCTTTCACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AGCTGAT

U12 Branch Point Sequence:

CCACCTTTCACA

Flanking Amino Acid:

PSPFSKLDSKVKAAFTRAYN

Intron Amino Acid Position:

1051

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.6

0.84

0.9

27.5

Major BPS

67.4

0.43

1.1

57.1

41.8

Major PPT

73.3

0.52

0.8

67.1

32.4

Minor 5ss

38.8

-1.3

3.2

57.6

46.6

Minor BPS

49.6

-0

1.8

56.93

42.7

Associated Gene:

Gene:

RFC1

Ensembl Gene ID:

ENSAPLG00000010594

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023981

40565225 - 40604804

39580

ENSAPLT00000011129

40565225 - 40604804

39580

ENSAPLT00000034003

40564906 - 40582809

17904