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Intron Name: Anas_platyrhynchos_platyrhynchos_4_40578282_40579821_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

40578282 - 40579821

Intron Length:

1540

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTTGAATTC

5'SS Class:

major

3'SS Sequence:

TTTGTTCACTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGTTCAC

U12 Branch Point Sequence:

TGTTTGTTCACT

Flanking Amino Acid:

MLDETPQKKKARRDSEEQTV

Intron Amino Acid Position:

239

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

61.1

0.26

1.2

61.3

38.4

Major BPS

74.9

0.62

1.1

77.4

37.4

Major PPT

74.9

0.56

0.9

74.6

35.4

Minor 5ss

36.8

-1.5

3.4

50.7

45.9

Minor BPS

52.4

0.16

2.4

79.89

42.3

Associated Gene:

Gene:

RFC1

Ensembl Gene ID:

ENSAPLG00000010594

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034003

40564906 - 40582809

17904

ENSAPLT00000023981

40565225 - 40604804

39580

ENSAPLT00000011129

40565225 - 40604804

39580