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Intron Name: Anas_platyrhynchos_platyrhynchos_4_40579900_40581565_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

40579900 - 40581565

Intron Length:

1666

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAACAGCT

5'SS Class:

major

3'SS Sequence:

TCCCTCATTACAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TTTTCCCTCATT

Flanking Amino Acid:

RQLQLEEDSELERQLHEDEE

Intron Amino Acid Position:

213

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.66

1.1

72.5

37.3

Major BPS

96.5

1.15

0.6

34.2

Major PPT

78.9

0.65

0.8

72.4

30.8

Minor 5ss

38.6

-1.3

3.4

57.4

46.8

Minor BPS

64.1

0.52

2.1

88.6

36.6

Associated Gene:

Gene:

RFC1

Ensembl Gene ID:

ENSAPLG00000010594

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023981

40565225 - 40604804

39580

ENSAPLT00000011129

40565225 - 40604804

39580

ENSAPLT00000034003

40564906 - 40582809

17904