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Intron Name: Anas_platyrhynchos_platyrhynchos_4_40595146_40597290_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

40595146 - 40597290

Intron Length:

2145

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAATGTTC

5'SS Class:

strong_major

3'SS Sequence:

GGTCAAAATACAG|A

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TCTACAT

U12 Branch Point Sequence:

TTGTGGTCAAAA

Flanking Amino Acid:

NKKKRIIYDSDSEEEVQSVK

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.2

0.73

75.8

34.6

Major BPS

70.2

0.5

1.1

77.2

Major PPT

57.6

0.17

1.1

48.1

Minor 5ss

41.4

-1

3.3

58.9

45.9

Minor BPS

42.8

-0.5

2.5

60.62

45.2

Associated Gene:

Gene:

RFC1

Ensembl Gene ID:

ENSAPLG00000010594

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011129

40565225 - 40604804

39580