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Intron Name: Anas_platyrhynchos_platyrhynchos_4_40670765_40671222_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

40670765 - 40671222

Intron Length:

458

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAT|GTAAGTATC

5'SS Class:

strong_major

3'SS Sequence:

TTCCTTCTGCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTTAAT

U12 Branch Point Sequence:

ATCCTGTTCATG

Flanking Amino Acid:

TAGKPTSPHHGQEPPAPPVD

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.5

0.86

0.9

87.3

Major BPS

0.92

0.9

86.2

29.1

Major PPT

73.9

0.54

0.9

69.4

36.9

Minor 5ss

42.7

-0.8

2.8

59.4

38.1

Minor BPS

40.8

-0.8

2.3

45.9

41.6

Associated Gene:

Gene:

SMIM14

Ensembl Gene ID:

ENSAPLG00000012479

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012990

40670732 - 40691856

21125