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Intron Name: Anas_platyrhynchos_platyrhynchos_4_4072921_4073482_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4072921 - 4073482

Intron Length:

562

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTAAGTATA

5'SS Class:

strong_major

3'SS Sequence:

TTTTCTTTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTCTT

U12 Branch Point Sequence:

TTTTCTTTTTTT

Flanking Amino Acid:

GAFQDMDDQQTFYAVYAFQA

Intron Amino Acid Position:

822

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.8

0.91

0.8

89.9

22.1

Major BPS

39.5

-0.6

4.3

85.7

34.9

Major PPT

96.8

1.05

0.5

96.1

13.2

Minor 5ss

-1

2.8

51.7

39.1

Minor BPS

46.2

-0.2

3.6

83.31

38.3

Associated Gene:

Gene:

ARHGEF38

Ensembl Gene ID:

ENSAPLG00000010561

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010994

4039884 - 4073668

33785