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Intron Name: Anas_platyrhynchos_platyrhynchos_4_40734547_40739731_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

40734547 - 40739731

Intron Length:

5185

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

AAG|GCAAGTAAT

5'SS Class:

strong_major

3'SS Sequence:

TTGTCTTTTGAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTAAT

U12 Branch Point Sequence:

TAATTTCTAATT

Flanking Amino Acid:

IAGPPDTPYEGGRYQLEIKI

Intron Amino Acid Position:

286

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

99.3

1.16

0.7

90.9

28.7

Major BPS

94.5

1.11

0.6

92.2

14.6

Major PPT

77.3

0.61

79.1

33.2

Minor 5ss

27.1

-2.6

3.8

41.5

45.1

Minor BPS

58.3

0.34

1.6

74.19

36.7

Associated Gene:

Gene:

UBE2K

Ensembl Gene ID:

ENSAPLG00000012484

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013015

40719037 - 40755103

36067