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Intron Name: Anas_platyrhynchos_platyrhynchos_4_40739791_40742353_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

40739791 - 40742353

Intron Length:

2563

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAATATAA

5'SS Class:

strong_major

3'SS Sequence:

TCTTGTGTTTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TTTATTTTAATT

Flanking Amino Acid:

PETYPFNPPKVRFITKIWHP

Intron Amino Acid Position:

306

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.9

0.75

75.8

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

78.8

0.65

0.9

76.9

37.3

Minor 5ss

37.3

-1.4

47.4

47.9

Minor BPS

76.1

0.9

1.1

87.86

31.1

Associated Gene:

Gene:

UBE2K

Ensembl Gene ID:

ENSAPLG00000012484

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013015

40719037 - 40755103

36067