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Intron Name: Anas_platyrhynchos_platyrhynchos_4_40780212_40781277_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

40780212 - 40781277

Intron Length:

1066

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAAGTTG

5'SS Class:

strong_major

3'SS Sequence:

TTCTTTTACACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TATTTAT

U12 Branch Point Sequence:

TTTTCTTTTACA

Flanking Amino Acid:

PTKFFTQPEKDFCNDRNYIS

Intron Amino Acid Position:

1097

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.73

72.8

39.1

Major BPS

88.7

0.96

0.8

36.5

Major PPT

83.1

0.74

0.8

79.9

31.1

Minor 5ss

39.7

-1.2

3.4

49.2

Minor BPS

77.6

0.86

1.5

87.29

30.4

Associated Gene:

Gene:

PDS5A

Ensembl Gene ID:

ENSAPLG00000012563

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013244

40772834 - 40847444

74611