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Intron Name: Anas_platyrhynchos_platyrhynchos_4_40801658_40806265_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

40801658 - 40806265

Intron Length:

4608

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CGG|GTAAGTGTT

5'SS Class:

strong_major

3'SS Sequence:

CTTCCCCCTCAAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCCCAT

U12 Branch Point Sequence:

ATTTTCCCATCT

Flanking Amino Acid:

FVRERTLDKRWRVRKEAMMG

Intron Amino Acid Position:

406

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.8

0.91

0.9

85.2

32.2

Major BPS

72.3

0.55

1.2

80.7

33.2

Major PPT

67.8

0.4

64.6

31.3

Minor 5ss

38.2

-1.3

3.4

49.9

46.4

Minor BPS

48.4

-0

2.1

75.25

41.3

Associated Gene:

Gene:

PDS5A

Ensembl Gene ID:

ENSAPLG00000012563

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013244

40772834 - 40847444

74611