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Intron Name: Anas_platyrhynchos_platyrhynchos_4_40816165_40816936_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

40816165 - 40816936

Intron Length:

772

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAACATTA

5'SS Class:

major

3'SS Sequence:

ATTTTTGTTTTAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTGTAAT

U12 Branch Point Sequence:

ATATCCTGAATA

Flanking Amino Acid:

QFNRYFYLLENLAWVKSYNI

Intron Amino Acid Position:

138

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.7

0.7

1.1

77.8

33.3

Major BPS

84.4

0.85

1.1

34.5

Major PPT

82.9

0.74

0.8

81.7

35.4

Minor 5ss

47.1

-0.3

2.9

65.1

46.1

Minor BPS

71.2

0.66

1.3

76.04

34.6

Associated Gene:

Gene:

PDS5A

Ensembl Gene ID:

ENSAPLG00000012563

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013244

40772834 - 40847444

74611