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Intron Name: Anas_platyrhynchos_platyrhynchos_4_40887630_40888706_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

40887630 - 40888706

Intron Length:

1077

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTTAGATTA

5'SS Class:

strong_major

3'SS Sequence:

TTTTGTCTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTTTTAT

U12 Branch Point Sequence:

TTATCTTTTATT

Flanking Amino Acid:

EDPPCQEESNREREEHSGIK

Intron Amino Acid Position:

621

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.9

0.73

1.1

30.6

Major BPS

84.1

0.85

0.9

75.3

39.4

Major PPT

90.9

0.92

0.7

88.9

28.1

Minor 5ss

37.9

-1.4

48.1

47.4

Minor BPS

69.5

0.7

1.5

84.38

36.3

Associated Gene:

Gene:

N4BP2

Ensembl Gene ID:

ENSAPLG00000013613

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030075

40872923 - 40902632

29710

ENSAPLT00000014194

40873386 - 40902632

29247