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Intron Name: Anas_platyrhynchos_platyrhynchos_4_40891004_40892362_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

40891004 - 40892362

Intron Length:

1359

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATGGGCA

5'SS Class:

strong_major

3'SS Sequence:

TTTCTTCTGCAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTTAAT

U12 Branch Point Sequence:

AATGCTTTAATG

Flanking Amino Acid:

EIFGPVGIDAGSLTVEDCVV

Intron Amino Acid Position:

1387

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.2

0.73

68.4

36.4

Major BPS

87.2

0.92

0.9

87.6

25.6

Major PPT

70.6

0.46

1.1

71.8

38.4

Minor 5ss

35.6

-1.6

3.5

47.4

48.2

Minor BPS

63.6

0.29

1.4

62.51

Associated Gene:

Gene:

N4BP2

Ensembl Gene ID:

ENSAPLG00000013613

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014194

40873386 - 40902632

29247

ENSAPLT00000030075

40872923 - 40902632

29710