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Intron Name: Anas_platyrhynchos_platyrhynchos_4_40999841_41002686_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

40999841 - 41002686

Intron Length:

2846

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTTAGTGTG

5'SS Class:

strong_major

3'SS Sequence:

TGGTCTCTCCTAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ACCTGAT

U12 Branch Point Sequence:

CCTCTCCCAACA

Flanking Amino Acid:

VNPVAIKPGAVAIPAISAQY

Intron Amino Acid Position:

493

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.6

0.79

1.1

77.3

37.8

Major BPS

0.5

59.3

39.1

Major PPT

70.1

0.45

0.9

62.3

39.8

Minor 5ss

32.7

-2

3.1

40.9

45.4

Minor BPS

46.5

-0.2

1.9

57.29

Associated Gene:

Gene:

RBM47

Ensembl Gene ID:

ENSAPLG00000013974

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014554

40998722 - 41016131

17410