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Intron Name: Anas_platyrhynchos_platyrhynchos_4_41005588_41016018_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

41005588 - 41016018

Intron Length:

10431

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCG|GTAAGGGAA

5'SS Class:

strong_major

3'SS Sequence:

TTCCTGTGTCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTAAT

U12 Branch Point Sequence:

CACCTTCTAATG

Flanking Amino Acid:

TRRGWIAGPGRFYRALNEFD

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.8

0.73

69.6

36.7

Major BPS

94.5

1.11

0.6

92.2

14.6

Major PPT

0.59

68.4

42.1

Minor 5ss

-2.4

3.5

46.9

Minor BPS

44.1

-0.5

1.6

41.52

37.6

Associated Gene:

Gene:

RBM47

Ensembl Gene ID:

ENSAPLG00000013974

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014554

40998722 - 41016131

17410