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Intron Name: Anas_platyrhynchos_platyrhynchos_4_41122169_41148560_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

41122169 - 41148560

Intron Length:

26392

Sequence Information:

Terminal Dinucleotides:

GT-AA

5'SS Sequence:

GAA|GTGCTTAGT

5'SS Class:

major

3'SS Sequence:

GAAGAGGTGAGAA|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

CAAGCAC

U12 Branch Point Sequence:

CCTTGCTGGACT

Flanking Amino Acid:

VQAACMLRYQKCCFPSWGRQ

Intron Amino Acid Position:

712

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

62.8

0.3

1.1

64.6

41.2

Major BPS

43.4

-0.4

1.3

47.1

36.1

Major PPT

21.3

-1.6

3.1

19.1

35.9

Minor 5ss

32.7

-2

42.1

42.5

Minor BPS

0.14

71.51

45.7

Associated Gene:

Gene:

APBB2

Ensembl Gene ID:

ENSAPLG00000006759

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040608

41121623 - 41293764

172142