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Intron Name: Anas_platyrhynchos_platyrhynchos_4_41127271_41128370_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

41127271 - 41128370

Intron Length:

1100

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATGGTTG

5'SS Class:

strong_major

3'SS Sequence:

ATTTGTATTACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGTTTAT

U12 Branch Point Sequence:

TTATACTTAGAT

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.3

0.76

72.1

39.9

Major BPS

81.3

0.78

1.1

71.7

44.6

Major PPT

80.8

0.69

0.9

73.8

Minor 5ss

46.4

-0.4

3.1

63.6

48.1

Minor BPS

58.9

0.36

1.9

79.84

41.3

Associated Gene:

Gene:

NSUN7

Ensembl Gene ID:

ENSAPLG00000006738

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046104

41127188 - 41167414

40227

ENSAPLT00000045163

41127188 - 41144096

16909

ENSAPLT00000006996

41127188 - 41172567

45380