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Intron Name: Anas_platyrhynchos_platyrhynchos_4_41148575_41149154_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

41148575 - 41149154

Intron Length:

580

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGTGAC

5'SS Class:

strong_major

3'SS Sequence:

TGCTCTGTTGCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCAGAA

U12 Branch Point Sequence:

GATTGCAGAATG

Flanking Amino Acid:

VSEAVQAACMLRYQKCLVAR

Intron Amino Acid Position:

699

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.89

0.9

77.6

30.7

Major BPS

49.9

-0

1.1

46.7

38.9

Major PPT

78.3

0.64

0.9

72.4

37.7

Minor 5ss

33.1

-1.9

3.2

40.3

40.2

Minor BPS

44.1

-0.5

2.1

51.53

42.5

Associated Gene:

Gene:

APBB2

Ensembl Gene ID:

ENSAPLG00000006759

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007023

41147407 - 41249883

102477

ENSAPLT00000040608

41121623 - 41293764

172142

ENSAPLT00000034018

41147407 - 41293764

146358

ENSAPLT00000032205

41147407 - 41293764

146358

ENSAPLT00000026057

41148407 - 41244409

96003