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Intron Name: Anas_platyrhynchos_platyrhynchos_4_41154131_41183801_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

41154131 - 41183801

Intron Length:

29671

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCG|GTGAGTCTG

5'SS Class:

strong_major

3'SS Sequence:

TTTGTCTGTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AATTCAT

U12 Branch Point Sequence:

CTGTTTCTAACA

Flanking Amino Acid:

RVWGVGRDNGRDFAYVARDK

Intron Amino Acid Position:

504

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.2

0.74

69.1

43.2

Major BPS

83.4

0.83

0.8

83.7

25.7

Major PPT

81.5

0.71

0.9

77.1

37.1

Minor 5ss

32.9

-2

42.1

44.4

Minor BPS

56.9

0.21

1.7

66.89

40.2

Associated Gene:

Gene:

APBB2

Ensembl Gene ID:

ENSAPLG00000006759

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026057

41148407 - 41244409

96003

ENSAPLT00000007023

41147407 - 41249883

102477

ENSAPLT00000040608

41121623 - 41293764

172142

ENSAPLT00000034018

41147407 - 41293764

146358

ENSAPLT00000032205

41147407 - 41293764

146358